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Caraway (Carum carvi L.) is an economically important spice and medicinal crop valued for its essential oil composition, particularly its high content of carvone and limonene. Despite its commercial relevance, compared with that of other Apiaceae species, the development of genomic resources remains limited. Molecular research has progressed from early dominant marker systems, including random amplified polymorphic DNA (RAPD) and inter simple sequence repeat (ISSR), to more recent SNP-based genotyping approaches that clarify population structure and flowering-type differentiation. However, key genomic resources, such as simple sequence repeat (SSR) markers, a high-quality reference genome, quantitative trait locus (QTL) mapping, genome-wide association studies (GWAS), and transcriptomic datasets, are still lacking. This review synthesises current knowledge on molecular marker applications in caraway and identifies major gaps limiting breeding progress. Evidence from related Apiaceae species indicates that systematic SSR development and integration of genome-based tools can substantially enhance breeding efficiency. Particular emphasis is placed on a phased strategy for SSR development in caraway, positioned as complementary to single-nucleotide polymorphism (SNP)-based approaches within a progressive genome-enabled breeding framework. Strengthening the molecular infrastructure of caraway will support precision breeding aimed at improving yield stability, essential oil quality, and environmental adaptability.

Pod dehiscence, also known as pod shattering, is the process by which mature pods open and release their seeds at physiological maturity. In vegetable soybean (Glycine max L.), premature seed release from mature pods is a major cause of yield loss during seed production. As pod dehiscence occurs within the dehiscence zone, understanding the physiological mechanisms governing its formation and degradation is essential. To investigate these mechanisms, we compared the activities of pectinase, polygalacturonase (PG), cellulase, indole-3-acetic acid (IAA), gibberellin (GA), abscisic acid (ABA) and zeatin (ZA) in the pod ventral sutures of dehiscent vegetable soybean and indehiscent grain soybeans. The ventral sutures of dehiscent vegetable soybean exhibited significantly higher activities of pectinase, polygalacturonase, and cellulase, but lower concentrations of IAA and GA than those of indehiscent grain soybean. Reduced levels of IAA and GA in the dehiscence zone were associated with increased activities of cellulase, pectinase, and polygalacturonase activities, which may accelerate cell wall degradation and promote lignification, thereby promoting pod dehiscence.

Assessing of genetic diversity is essential for identifying useful alleles for crop improvement. This study evaluated genetic diversity among two cassava breeding populations for total carotenoid content (TCC), dry matter content (DMC), and hydrogen cyanide (HCN) concentration using trait-linked single nucleotide polymorphism (SNP) markers. A total of 360 genotypes were analysed, including 261 from the IITA breeding programme (Population 1), 23 progenitor lines, and 76 from the University of Ibadan Cassava (UIC) breeding programme (Population 2). Minor allele frequency (MAF), gene diversity (GD), observed heterozygosity (H_e), and polymorphic information content (PIC) were computed. Principal component analysis (PCA) and hierarchical clustering were performed to examine genetic variation and population structure. Call rates were high (96–100%). MAF ranged from 0.00 to 0.50, with mean values of 0.28, 0.28, and 0.29 for Population 1, Population 2, and progenitors, respectively. GD averaged 0.36, 0.36, and 0.35 across these groups. Observed heterozygosity was 0.42, 0.41, and 0.43, while PIC values averaged 0.29, 0.27, and 0.27 for Population 1, Population 2, and progenitors, respectively. PCA and clustering analyses grouped the genotypes into three clusters containing 257, 88, and 15 genotypes. The first two principal components explained 39.1% of the total genetic variation. The results indicate substantial genetic diversity among the studied genotypes, suggesting strong potential for allele pyramiding and highlighting the informativeness of the SNP markers used.

Foxtail millet (Setaria italica) is a resilient yet underutilised C₄ cereal valued for its adaptability to abiotic stress and high nutritional content. While panicle traits have been linked to yield in many cereals, the spatial arrangement of foxtail millet panicles remained unexplored, especially among locally adapted genotypes. This study aimed to characterise spatial panicle architecture traits and to analyse the DUF-640, a gene controlling primary branch number, among Indonesian foxtail millet genotypes. Results revealed substantial variation in panicle architecture, including primary branch number, grain number, and grain density in eight Indonesian foxtail millet genotypes, suggesting potentially greater diversity across broader germplasm. In contrast to the substantial panicle trait variations, phylogenetic and structural analyses showed that DUF-640 genes were highly conserved across Setaria species. Although previously associated with primary branch development, the coding sequence of DUF-640 was not associated with branching variation in this study. However, its high sequence conservation across Setaria species suggests a vital and possibly conserved regulatory function. This study enhances the understanding of the morphological and genetic diversity of foxtail millet, particularly among Indonesian foxtail millet genotypes. Future research should focus on the functional characterisation of DUF-640 and the identification of regulatory sequences governing its gene expression.

The testing and evaluation of native populations of perennial ryegrasses (Lolium perenne L.) collected from the Republic of Srpska, Bosnia and Herzegovina were conducted from 2020 to 2022 at experimental fields and laboratories of the Institute for Genetic Resources and the Agricultural Institute of the Republic of Srpska in Banja Luka. Six native populations (labelled G1–G6) and two cultivars, Esquire and Tivoli (labelled G7 and G8), were analysed in this study. The following traits were examined: the plant height (cm), number of generative stems per plant, inflorescence length (cm), number of spikes per inflorescence, seed mass per inflorescence (g), and seed yield per plant (g). The results showed that all the native populations exhibited higher average plant heights compared to the Esquire standard (G7). Population G2 had the highest average number of spikes per inflorescence (26.8), while population G4 achieved the greatest average inflorescence length (27.7 cm). Statistically significant differences in the inflorescence length were observed between populations G2, G3, G4, and G6, compared to the standards G7 and G8 (Esquire and Tivoli). The genotype and year had a significant impact on the seed yield per plant. The average yield ranged from 32.4 g (G7) to 53.4 g (G4). The seed yield per plant showed a strong positive correlation with the number of generative stems per plant, the inflorescence length, and the number of spikes per inflorescence. The native populations G4 and G5 achieved significantly higher seed yields per plant compared to the other populations and may serve as highly valuable material for breeding programmes.

Iris × germanica L. (bearded iris) is a popular ornamental plant with numerous commercially important cultivars; however, little is known about the genetic diversity and population structure of the species, as limited DNA markers have been explored. In this study, 34 722 expressed sequence tag (EST)-simple sequence repeat (SSR) loci were identified from RNA sequencing data. The most abundant SSR motifs belonged to the tri-nucleotide type, of which the most common were AGG/CCT followed by AAG/CTT. Overall, 50 primer pairs derived from these EST-SSRs were randomly selected and synthesized, and 22 primer pairs with good polymorphism effects were used for the following experiment. Correlation analysis of nine floral traits showed that most floral traits had significant correlations with each other. Association analysis between SSR molecular markers and nine floral traits showed that 11 EST-SSR markers were associated with 3–6 floral traits. The cluster tree constructed by using the unweighted pair group method demonstrated that the cultivars that had the same parents or similar colour were clustered together. The genotypic relations of most cultivars were consistent with their pedigree-based relationships. The EST-SSR loci identified in this study will facilitate the exploitation of genetic resources and molecular breeding of I. × germanica.

This study investigated the genetic basis of days to heading (DTH) in tropical japonica rice using F₂ populations derived from late-maturing Rojolele and early-maturing Rojolele Srinuk varieties. Phenotypic analysis of DTH showed continuous distribution and positive skewness. Whole genome sequencing (WGS) derived single nucleotide polymorphism (SNP) from early and late-heading bulks were used to identify three candidate regions with strong association to DTH: qDTH3.1 and qDTH3.2 on chromosome 3, and qDTH7.1 on chromosome 7, with the latter linked to the Oryza sativa Pseudo-Response Regulator 37 (OsPRR37) gene. InDel markers validated qDTH7.1’s significant linkage to DTH, particularly marker ID14, which is effective for marker-assisted selection of early DTH in Rojolele background.

Pod dehiscence or pod shattering from mature soybean (Glycine max L.) is one of the most outstanding disadvantages in domesticated cultivars. Pod shattering in relation to 16 quantitative traits and 3 qualitative traits among 140 cultivars of vegetable soybeans, grain soybeans and small-grain soybeans was evaluated over two years. We found the pod shattering percentage is positively correlated with the number of productive branches, pod width, pod length, pod area, 100-seed weight, 1-seeded-pod percentage, 2-seeded-pod percentage and seed protein content, but negatively correlated with the plant height, pod height at the bottom, number of nodes on the main stem, 3-seeded-pod percentage, 4-seeded-pod percentage and seed oil content. The pod shattering percentage in vegetable soybeans is remarkably high, reaching up to 93%, 7.8 times higher than that of grain soybeans. A schematic model of the characteristics for shatter-susceptible and shatter-resistant soybean cultivars is proposed. The pod shattering in vegetable soybeans is related to the “umbrella-shaped” architecture and pod size. It is suggested to select lines with more 2-seeded and 3-seeded pods for vegetable soybeans, but a higher seed oil content and greater node number on the main stem for grain soybeans and small-grain soybeans, to avoid pod shattering in future breeding programmes.

Despite all the complications that arise with root research, such as slow, laborious, and unclear genetics, roots are a promising object of interest for breeders because many root traits are compatible with high yield potential. It is a great challenge for further research that there is a wide demand for information on the “hidden half of plant metabolism” from many research fields. We have summarized the main obstacles in root system research and sketched a solution for breeding in field conditions so that the result was more meaningful to the farmer. (i) The most important challenge in root research is linking the functional identification of root system properties with the aboveground parts. (ii) Field breeding is irreplaceable, and methods allowing the evaluation of roots under field conditions are indispensable. (iii) Low heritability of root system trait discourages breeders. However, root properties show broad genotypic variability, allowing the efficient use of these traits as selection criteria. (iv) The root traits are variable, and many fluctuate under the influence of environmental factors, which complicates efforts to define ideotypes and explains the different conclusions obtained by researchers from different environments. The breeding programs targeting the root system are sporadic even in a global context. This is a great reserve for breeding progress in the era of climate change, water scarcity, a possible shift to extensive farming systems, and in the era of environmental programs.

Heading date determines rice seasonal and regional adaptation, while plant height is an important trait related to rice lodging resistance. In this study, a recombinant inbred line population was used to detect quantitative trait loci (QTLs) for both traits in long-day (LD) and short-day (SD) environments. Three and two QTLs for heading date were detected in LD and SD environments, respectively. Notably, qHD8 and qHD10 were commonly detected in both environments. Five and four QTLs for plant height were identified in LD and SD environments, respectively. Among them, qPH3, qPH5 and qPH6 showed no pleiotropic effects on heading date and were detected in both environments. These three QTLs are considered to be the primary targets for improving rice plant height. Additionally, two genomic regions exhibited pleiotropic effects on both heading date and plant height. The alleles delayed the heading date while simultaneously increasing plant height. This study indicated that most QTLs for heading date are sensitive to photoperiod and have pleiotropic effects on plant height, thereby complicating their application in breeding programs. These findings provide useful information for the breeding of rice varieties with desired heading dates and plant heights.

Temperature is a key parameter that influences the uptake and subsequent utilization of nitrogen by plants. Both suboptimal and supraoptimal temperatures can impair nutrient uptake. The close relatives of bread wheat provide a possible source for breeders to increase stress tolerance. The effect of the increasing temperature (5, 10, 15, 20 and 30 °C) on nitrate uptake and metabolism in five modern spring cultivars of bread wheat (Triticum aestivum L.) and two cultivars of emmer wheat (Triticum dicoccon Schrank), was monitored. Wheat plants were grown under controlled conditions in hydroponics. The parameters of Michaelis-Menten kinetics, maximum uptake rate (V_max), the Michaelis constant (K_m) and selected characteristics of nitrate metabolism, the activity of nitrate reductase (NR) and contents of nitrate in leaves were observed. The effect of temperature was significant for all studied traits except K_m, while the cultivar factor was significant for V_max, K_m, NR and root/shoot ratio (R/S). Emmer wheat cultivar Rudico had significantly higher V_max at 5, 15, 20 and 30 °C than all bread wheat cultivars, on average 7.07, in comparison with 4.09–4.43 μmol NO₃^–/g FW/h in bread wheat cultivars. Emmer wheat Rudico and Tapiruz had significantly higher K_m (on average, 41.59 and 47.22 μM NO₃^–) than bread wheat cultivars (27.59–33.44 μM NO₃^–). Differences in the studied kinetic parameters of nitrate uptake offer the possibility of using T. dicoccon genotypes in breeding for better nitrogen use efficiency.

Kaliurang is one of the local taro cultivars in Indonesia, potentially due to its high productivity and delicacy. This study analysed morpho-genetic variation between one diploid and three tetraploid Kaliurang taro clones from in vitro polyploid induction after plantlet acclimatization in the greenhouse for 6 weeks. Plants’ morphological characters were analysed using the unweighted pair group method with arithmetic mean (UPGMA) method based on 50 characters according to the taro descriptor from the International Plant Genetic Resources Institute (IPGRI). Furthermore, a morphometric characterization based on the Euclidean distance of 17 digitations from mature leaves, was analysed with the Analysis Phylogenic and Evolution package in R software. DNA band pattern was also performed with ISSR to analyse the clone’s genetic variance. The results showed morpho-genetic character diversity in diploid and tetraploid plants. A plant morphological study revealed that 22 out of 50 characters were distinct, with similarity coefficients ranging from 0.35 to 0.78. Leaf geometric morphometric analysis showed changes in five digitations and formed three clusters. Twelve ISSR primers out of twenty amplified the sequence of the Kaliurang taro genome to yield two clusters with a similarity coefficient of 0.71–0.83. Based on these three characterization approaches, tetraploid clones (K2 and K3) consistently differed morphologically from diploid clones (K0).

The objective of this study was to investigate the diversity of 59 accessions of barley using inter simple sequence repeat (ISSR), conserved DNA-derived polymorphism (CDDP), and start codon targeted (SCoT) markers. A total of 391 amplified polymorphic bands were generated using 44 ISSR, 9 CDDP, and 12 SCoT primers that produced 255, 35, and 101 polymorphic bands, respectively. The average values of gene diversity were 0.77, 0.67, and 0.81 for ISSR, CDDP, and SCoT markers, respectively. The mean values of polymorphism information content for ISSR, CDDP and SCoT markers were 0.74, 0.63, and 0.80 respectively. The discrimination power of the three approaches for assessing allelic diversity in barley accessions ranked as follows: SCoT > ISSR > CDDP. The barley accessions were classified and clustered into two main groups. Molecular variance analysis revealed 15, 9, and 14% variability among populations with ISSR, CDDP, and SCoT markers, respectively. The Mantel test results revealed that the three molecular marker matrices had significant positive relationships. The SCoT markers might be useful tools for selecting appropriate parents for a breeding program.

Horsegram (Macrotyloma uniflorum) – an important, self-pollinated food legume, however due to limited genomic and genetic resources the genetic improvement could not be achieved as compare to other major legumes. Our work aims at finding novel microsatellite markers and their use for the construction of a linkage map from 157 individuals of F₉ recombinant inbred lines (RILs) of horsegram. The determinate growth habit and plant height are important traits for its suitability for different cropping systems. The genotypic data were generated by screening 2 395 molecular markers, of which 600 (25.05 %) polymorphic markers were selected. Two-hundred eighty-seven (287) markers were mapped on ten linkage groups (LGs) at a log of odds (LOD) of 3.5 straddling 796.76 cM with 2.78 cM of marker density. For the identification of the quantitative trait loci (QTLs), the phenotypic data recorded on the RILs for the plant height and growth habit were analysed using the statistical tools JoinMap®and Windows QTL cartographer, based on the composite interval mapping (CIM) technique. Across the ten linkage groups, we detected four QTLs (LOD ≥ 2.5) for four traits. All the traits were major QTLs as indicated by the percentage of phenotypic variance (PVE) (≥ 10%) that ranged from 13.5% to 40.3%, therefore, this is very important information which can be used in marker-assisted selection (MAS). The present genomic information generated in this orphan crop, thus, provides the base for genetic improvements by devising molecular breeding strategies.

Knowledge of gene actions governing begomovirus resistance and plant architectural traits is a prerequisite for a successful hybrid breeding programme. Therefore, the gene actions associated with these traits were studied in two intervarietal crosses of Cucurbita moschata (C₁: Punjab Nawab × MVSR-6711 and C₂: Punjab Nawab × P-135). We used the generation mean analysis of six generations for this purpose. Significant differences between the generation means were observed for all the traits in both crosses. The parental lines differed significantly in most of the studied traits. The nature and magnitude of the gene effects of seventeen traits varied by trait and cross. A simple additive dominance model was adequate for the internode number, leaf length and width, petiole length, fruit weight and cavity diameter in C₁ and the number of fruits/plant in C₂. The non-allelic interaction was found to be significant for a majority of the traits including the per cent disease index of the squash leaf curl China virus, tomato leaf curl New Delhi virus and their mixed infections, which indicated, that recurrent selection in biparental progeny might be useful for the accumulation of genes with additive effects. Duplicate epistasis was observed for the vine, internodal and peduncle length in C₁ and the internode number, petiole and peduncle length, peduncle and fruit polar diameter in C₂. This information will help to establish a breeding program for the simultaneous improvement of virus resistance and yield traits in pumpkins.

The CBF (C-repeat binding factors) genes play important roles in response to abiotic stress and environmental changes. In the present study, a total of 18 CBF genes were identified from a grapevine. Their domains, phylogenetics, and collinearity were analysed. The results revealed, that 18 VviCBF genes were distributed on 10 chromosomes unevenly in the grape genome. Promoter data analysis showed that the CBF gene has many cis-acting elements related to plant growth and development, light response, hormone, and abiotic stress response. We found that six VviCBF genes including, VviCBF5, VviCBF13, VviCBF14, VviCBF15, VviCBF16, and VviCBF18 differentially expressed during fruit developmental stages. Furthermore, four VviCBF genes including, VviCBF1, VviCBF3, VviCBF6, and VviCBF11 were expressed at the early stage of bud dormancy, whereas, nine VviCBF genes were expressed at the bud dormancy-breaking stage. Additionally, various VviCBFs genes respond to different abiotic and biotic stress. These findings will lay a foundation for further study of the CBF genes in bud dormancy, downy mildew, and abiotic and biotic stresses.

Rf(fa), a new restoring fertility gene in rice, was previously located to a large region on Chromosome 10. The large number of genes within the region made cloning of Rf(fa) difficult. To perform the cloning and further elucidate the molecular mechanism, we reconstructed a mapping segregation population (BC₁F₁) of 12 000 plants. Using the population and polymorphism of simple sequence repeat (SSR) molecular markers, we finally mapped Rf(fa) between the two SSR molecular markers MM2000 and RM25658, within a 78.87 kb region. By de novo sequencing of a restoring line of CMS-FA hybrid rice, we obtained the genomic sequence of the mapping region, which provided the basis for the prediction of the candidate gene(s) of the target gene and for the comparison of genomic sequence differences between wild and cultivated rice. Within the mapping region, the genomic sequence of the wild rice was significantly different from that of cultivated rice. There were ten genes in the final mapping region. A pentatricopeptide repeat (PPR) protein gene was predicted as the candidate gene of Rf(fa). Our results laid a solid foundation for the final cloning and molecular mechanism analysis of the gene. The identified molecular markers tightly linked to Rf(fa) will facilitate the marker assisted selection in breeding of CMS-FA hybrid rice.

The study is aimed at evaluating the pod shattering resistance of F₈ soybean lines based on the shattering incidence and shattering severity. The materials consist of fourteen F₈ soybean lines and two check cultivars. The pod shattering incidence was examined by using the oven-dry method, meanwhile, the shattering severity was evaluated based on the severity of the pod opening. The pod shattering resistance based on the shattering incidence resulted in five resistant lines (7-10% shattering), seven moderate lines (13-23% shattering), one susceptible line (53% shattering), and one very susceptible line (100% shattering). The pod shattering resistance based on the shattering severity showed that the pod opening on the ventral side differed between the lines and between the shattering degree, and it tends to form sigmoid curves with a different peak position for each shattering degree. The shattering severity of the resistant, moderate, and susceptible lines reached a peak at 60 °C, 50 °C, and 40 °C, respectively. A longer pod length indicated by the length of the dorsal (r = 0.827**) and ventral (r = 0.880**) sides of the pod, a higher total pod weight (0.827**), and a larger seed size (0.794**) will increase the degree of susceptibility to pod shattering. Those characteristics were considered to be the ones that should be used as the selection criteria in the breeding programme for pod shattering resistance in soybeans.

The designation of traditional varieties of grapevine is usually based on verbal information or very dated records. Old rare cultivars found in the Czech Republic were identified by Simple Sequence Repeat (SSR) analysis, a generally accepted method for cultivar identification. These cultivars are primarily maintained in a national collection of genetic resources. Finally a total of 102 candidate genotypes was selected where 49 traditional varieties were identified on the base of nine SSR loci compared with the European Vitis Database. Thirty-six items were registered under the correct designation. The remaining genotypes included four clones, and two genotypes could be described as synonyms. Seven genotypes were found to be incorrectly marked. For three of them, the correct name was found in the database under their SSR profile and four items were considered to be unique as no identical profile was found.

An experimental population commonly used in genetic analyses of gene or quantitative trait loci (QTLs) in rice is chromosome segment substitution lines (CSSLs). In the present study, with the typical indica variety Guangluai 4 as a donor and japonica variety Taichung 65 as a recipient, seven CSSLs carrying F₁ pollen sterility genes S-b, S-d, S-e, S-b/S-d, S-b/S-e, S-d/S-e, and S-b/S-d/S-e were obtained by specific selection for the target genes, non-specific selection for the genome of the recurrent parents in four backcross populations (BC₁F₂, BC₂F₂, BC₃F₂ and BC₃F₃). We evaluated the genetic effect of the F₁ pollen sterility genes using 35 F₁ hybrid individuals in crosses derived from CSSLs and Taichung 65. Pollen fertility of F₁ hybrid plants was observed and the results indicated that the single genes S-b, S-d and S-e can cause 67.7%, 14.6% and 53.2% of pollen sterility, respectively. Multiple genes S-b/S-d, S-b/S-e, S-d/S-e, and S-b/S-d/S-e can cause 76.6%, 85%, 68.7%, and 93% of pollen sterility, respectively.

Plant lectins have become efficient sources of insect resistance in crops. The present study was conducted to identify, amplify, clone and characterize the plant lectin gene GNA. The lectin, present in Galanthus nivalis (snowdrop), is an agglutinin toxic to hemiptera. The attempt was made to elucidate the relationship of the lectin gene trGNA (GNA isolated and characterized from Turkey) with other previously cloned lectins having insecticidal activity and to ensure the presence of the conserved mannose-binding region/site in the gene sequence. The full-length cDNA of trGNA was 477 bp that contained a 333 bp open reading frame encoding 157 amino acid proteins with 23 amino acids of signal peptide. BLAST results showed that trGNA has 89-97% similarity with previously reported GNA sequences while it has 84-96% similarity with earlier reported GNA protein sequences. No intron was detected within the region of genomic sequence corresponding to trGNA full-length cDNA. According to the search results from the NCBI (National Centrer for Biotechnology Information database), trGNA from Galanthus nivalis is most similar to the previously reported lectin sequences of Narcissus tazetta with a similarity percentage of 87%. The obtained results are useful for engineering of plants with enhanced insecticidal activity against chewing and sucking insects, causing crop pests. In addition, medical application of lectins may also be considered.

Fusarium head blight (FHB) is a disease of small grain cereals caused by Fusarium species. The pathogens affect spikes and kernels, resulting in reductions of yield and its quality. The present study was conducted to evaluate variation in the FHB resistance of wheat F₂ hybrids derived from 16 crosses between winter wheat cultivars of various origin and with different susceptibility to FHB. Plants were inoculated with a conidial suspension consisting of a mixture of F. culmorum, F. graminearum and F. avenaceum isolates. After harvest 1000-kernel weight, number of kernels per spike and kernel weight per spike were evaluated in inoculated and control plants. Disease symptoms were observed on kernels of infected plants and the percentage of Fusarium-damaged kernels (FDK) was calculated. The data were statistically evaluated using uni- and multivariate analyses. A significant influence of genotype and treatment on all observed characteristics was detected. Contrasts between control and inoculated plants showed that inoculation lowered the mean values of all the yield-related traits significantly (in the statistical sense). Results of uni- and multivariate analyses enabled us to find three cross combinations which exhibited a low FDK percentage and simultaneously a relatively low reduction of 1000-kernel weight after inoculation. They may be promising for breeding wheat with improved resistance to FHB.

One of the aims in red clover (Trifolium pratense) breeding is to increase the polyphenol oxidase (PPO) activity, which may effectively reduce protein breakdown in silage and when cattle are fed by fresh clover. We analysed total PPO activity spectrophotometrically and on the level of gene expression using real-time quantitative PCR in single plants derived from an interspecific T. pratense × T. medium hybrid. Experiments were performed for two years and evaluated according to the general linear model with three factors (family, year, and cut). The analysis revealed considerable variability in total PPO activity between individuals and between families. Four families and two individuals with significantly higher PPO activity were selected. Their PPO activity ranged from 3.411 to 3.547 mkatal/min/g and from 4.041 to 5.731 mkatal/min/g, respectively, in comparison with the control variety Amos (2.370 mkatal/min/g). The majority of PPO transcripts were expressed by the two genes PPO1/5 and PPO2. In some genotypes, the PPO5 gene was expressed. Quantitative PCR confirmed the highest activity of PPO genes in seven hybrid plants with higher DNA contents corresponding to 30 chromosomes with 815 013 copies per plant. Our results indicate the suitability of combining two methods for improved selection: initial expression analysis to assess the PPO transcript level indicating gene activity and subsequent enzymatic assay.

The Lancelot variety is a late to semi-late six-row feeding winter barley. It was developed at the Breeding Station, Lužany, SELGEN a.s. and registered in the Czech Republic in 2013. Lancelot has very good resistance to winter stresses in combination with resistance to BaMMV/BaYMV (Barley mild mosaic virus/Barley yellow mosaic virus) based on the gene rym4.

Compared to the large effort spent developing Brazilian bread wheat cultivars, relatively few soft wheat cultivars for cookie flour were released in this country in the recent years. The objective of this study is to propose a model to predict wheat cultivars with improved manufacturing quality for the cookie industry while maintaining production for the growers. A database was compiled originally with 1674 entries with field, milling and flour quality parameters from the year 2000 to 2008 crop seasons. The critical specifications of 14 commercial cookie flours were compared and it was determined that the variables farinograph water absorption appeared in 14 out of 41 specifications (34.1%), alveograph strength appeared in 13 out of 41 specifications (31.7%), wet gluten appeared in 11 out of 41 specifications (26.8%), alveograph tenacity appeared in two out of 41 specifications (4.9%), and alveograph dough extensibility appeared in one out of 41 specifications (2.5%). Using frequency percentages as model coefficients a Brazilian Cookie Wheat Score Model was proposed:BCWS =ABS × 0.341 + W × 0.317 + WG × 0.268 + P × 0.049 + L × 0.025. The ideal score for a wheat genotype to be classified as cookie wheat for the Brazilian market is within the optimum interval from 56.1 to 81.2. To validate this model and its proposed interval, 277 wheat entries from the 2008 crop year were tested under the following conditions: first, wheat genotypes that yielded less than the average of bread wheat genotypes were discharged; second, wheat genotypes without the full set of values for the model variables were discharged. Twenty wheat genotypes, out of 277, were within the optimum interval and were proposed as wheat genotypes to produce cookie flour. The validation results indicated that, using the BCWS Model, along with the established conditions, a wheat breeder will have 75% chance of finding a potential cultivar with acceptable cookie functionality from a set of experimental lines.

An isolate of Brome mosaic virus (BMV) was originally isolated from Agropyron repens and maintained in Hordeum vulgare. The full-length genome of this isolate (BMV-CZ) was sequenced. Phylogenetic analysis revealed that BMV-CZ shared a minimum of 95.6% sequence identity, localized in the 5'-UTR of RNA-1 with the other BMV isolates from the database, and a maximum of divergence of 30.8% with Broad bean mottle virus localized in the 5'-UTR of RNA-3. This is the first sequence report of full-length BMV from the Czech Republic.

Changes of quality traits such as grain sugar, starch, and protein content in full waxy and normal wheat in field grown samples was studied during grain filling. Compared to the normal line, the soluble sugar, sucrose and pentosan contents were higher in the waxy isoline. The highest pentosan content in waxy wheat was 22-27 days after flowering (DAF), while the highest fructan content was 7-12 DAF. In addition, the quality dynamic changes of two wheat lines were similar except for starch content during grain filling, the V_max of starch synthesis were highest at 17-22 DAF in the waxy line, while this was at 22-27 DAF in the normal line. The results indicated that according to the different dynamic changes between waxy and common wheat, the quality of waxy wheat may be improved by optimum cultivation measures.

The aim of the study was to select wheat-Aegilops biuncialis addition lines carrying Aegilops biuncialis chromosomes differing from those which were introgressed into the wheat-Ae. biuncialis addition lines produced earlier in Martonvásár, Hungary. In the course of the experiments new wheat-Ae. biuncialis addition lines carrying chromosomes 2U^b, 6M^b, 6U^b; 5U^b, 3U^b, 7U^b; 5M^b, 6M^b and 7M^b were selected. The 2U^b disomic addition line is relatively stable, as 91% of the progenies contain this chromosome pair. The 6M^b disomic addition line proved to be dwarf and sterile, but it still exists as a monosomic addition line. Progenies analysed from the 6U^b monosomic addition line did not carry the 6U^b chromosome. One plant containing the 5U^b, 3U^b and 7U^b chromosomes and one plant carrying 5M^b, 6M^b and 7M^b chromosomes showed very low fertility. Each of the plants produced a single seed, but seeds of the parent plants are still available. Line No. 49/00 carried a submetacentric Ae. biuncialis chromosome pair and the chromosome number 44 has been constant for several generations. After FISH no hybridisation site was observed on the Ae. biuncialis chromosome pair using the pSc119.2 and Afa family repetitive DNA probes, so it was not possible to identify the Ae. biuncialis chromosome pair. However, the use of wheat SSR markers and the (GAA)_n microsatellite DNA probe allowed it to be characterised more accurately. These new lines facilitate gene transfer from Ae. biuncialis into cultivated wheat and the selection of U and M genome-specific wheat SSR markers.

The resistance Heils Hanna (HH) was postulated in several tens of 471 previously tested winter barley cultivars. In this paper, new tests on 29 of these cultivars are reported. Thirty-two reference isolates of Blumeria graminis f.sp. hordei held in the pathogen genebank at the Agricultural Research Institute in Kromeriz, Ltd. including a Japanese isolate and five Israeli isolates were used for response tests. However, the resistance HH conferred by the gene Mla8 and herein characterised by reaction type 0 to an old Japanese isolate known as Race I was now postulated only in four cultivars. In the other 25 cultivars another resistance, characterised by reaction type 0 to Race I and also to two Israeli isolates, was detected. In addition to the two mentioned resistances, eight known (Bw, Dr2, Ha, IM9, Ln, Lv, Ra and Sp) resistances were found in the set examined. Lomerit was the only registered cultivar tested here in which the newly detected resistance was present alone, therefore, it is recommended that this resistance be designated Lo.

The must characteristics of some old varieties (present on the list of varieties allowed for land wine making) were compared with their commercial relatives, in order to estimate their specific benefits and advantages for wine processing. In the case of Portuguese blue and Pinot noir pr飯ce, we additionally identified the influences of environmental conditions on their must composition and wine quality. Clear differences in sugar accumulation among varieties were detected, as well as differences in earliness.