Czech J. Genet. Plant Breed., 2015, 51(3):110-116 | DOI: 10.17221/32/2015-CJGPB
Karyotype analysis of Lablab purpureus (L.) Sweet using fluorochrome banding and fluorescence in situ hybridisation with rDNA probesOriginal Paper
- 1 Key Laboratory of Research and Utilization of Ethnomedicinal Plant Resources of Hunan Province, Huaihua University, Huaihua, Hunan, P.R. China
- 2 Key Laboratory of Xiangxi Medicinal Plant and Ethnobotany of Hunan Higher Education, Huaihua University, Huaihua, Hunan, P.R. China
- 3 Department of Life Sciences, Huaihua University, Huaihua, Hunan, P.R. China
The mitotic chromosomes of Lablab purpureus (L.) Sweet were characterised using sequential combined propidium iodide (PI) and 4',6-diamidino-2-phenylindole (DAPI) (CPD) staining and fluorescence in situ hybridisation (FISH) with 5S and 45S rDNA probes. The detailed karyotype of this species was established using prometaphase chromosomes. After CPD staining, CPD and DAPI+ bands were shown simultaneously. CPD bands occurred in the proximal regions of the long arms of all chromosome pairs and at all 45S rDNA sites, while the DAPI+ bands appeared in all centromeres. FISH with rDNA probes revealed one 5S locus and eight 45S loci. The single 5S locus was interstitially located on the long arms of the shortest chromosome pair. Among the 45S loci, two large loci were located in the secondary constrictions of the short arms of two chromosome pairs; six small or minimal loci were proximally located on the short or long arms of six chromosome pairs. Each prometaphase chromosome pair could be identified using the CPD and DAPI+ bands, the rDNA-FISH signals in combination with the chromosome measurements and condensation patterns. The karyotype was formulated as 2n = 2x = 22 = 14m (2SAT) + 6sm + 2st (2SAT), and the asymmetry indices, CI, A1, A2, As K%, AI and the Stebbins category were 38.23 ± 7.06, 0.36, 0.31, 61.99, 5.68 and 2B, respectively.
Keywords: combined PI and DAPI staining; FISH; hyacinth bean; karyotyping; ribosomal gene
Published: September 30, 2015 Show citation
ACS | AIP | APA | ASA | Harvard | Chicago | Chicago Notes | IEEE | ISO690 | MLA | NLM | Turabian | Vancouver |
References
- Ali M.A., Hasan M.M., Mia M.S., Ahmad Q.N. (2011): Karyotype analysis in lignosus bean (Dipogon lignosus) and lablab bean (Lablab purpureus). Journal of the Bangladesh Agricultural University, 9: 27-36.
Go to original source...
- Bonifácio E.M., Fonsêca A., Almeida C., Dos Santos K.G., Pedrosa-Harand A. (2012): Comparative cytogenetic mapping between the lima bean (Phaseolus lunatus L.) and the common bean (P. vulgaris L.). Theoretical and Applied Genetics, 124: 1513-1520.
Go to original source...
Go to PubMed...
- Chaowen S., Liu J.Y., Xiong Z.Y., Song Y.C. (2004): Karyotype analysis of Psophocarpus tetragonolobus (L.) DC by chromosome banding and fluorescence in situ hybridization. Caryologia, 57: 387-394.
Go to original source...
- Chen R.Y. (2003): Chromosome Atlas of Major Economic Plants Genome in China (II). Beijing, Science Press. (in Chinese)
- Cheng Z., Buell C.R., Wing R.A., Jiang J. (2002): Resolution of fluorescence in-situ hybridization mapping on rice mitotic prometaphase chromosomes, meiotic pachytene chromosomes and extended DNA fibers. Chromosome Research, 10: 379-387.
Go to original source...
Go to PubMed...
- Chinese Pharmacopoeia Commission (2010): Pharmacopoeia of the People's Republic of China 2010 (Volume I). Beijing, Chinese Medicine Science and Technology Press. (in Chinese)
- Chung M.C., Lee Y.I., Cheng Y.Y., Chou Y.J., Lu C.F. (2008): Chromosomal polymorphism of ribosomal genes in the genus Oryza. Theoretical and Applied Genetics, 116: 745-753.
Go to original source...
Go to PubMed...
- Datson P.M., Murray B.G. (2006): Ribosomal DNA locus evolution in Nemesia: transposition rather than structural rearrangement as the key mechanism? Chromosome Research, 14: 845-857.
Go to original source...
Go to PubMed...
- de A. Bortoleti K.C., Benko-Iseppon A.M., de Melo N.F., Brasileiro-Vidal A.C. (2012): Chromatin differentiation between Vigna radiata (L.) R. Wilczek and V. unguiculata (L.) Walp. (Fabaceae). Plant Systematics and Evolution, 298: 689-693.
Go to original source...
- de Moraes A.P., dos Santos Soares Filho W., Guerra M. (2007): Karyotype diversity and the origin of grapefruit. Chromosome Research, 15: 115-121.
Go to original source...
Go to PubMed...
- Fuchs J., Kuhne M., Schubert I. (1998): Assignment of linkage groups to pea chromosomes after karyotyping and gene mapping by fluorescent in situ hybridization. Chromosoma, 107: 272-276.
Go to original source...
Go to PubMed...
- Fukui K., Iijima K. (1991): Somatic chromosome map of rice by imaging methods. Theoretical Applied Genetics, 81: 589-596.
Go to original source...
Go to PubMed...
- Fukui K., Mukai Y. (1988): Condensation pattern as a new image parameter for identification of small chromosomes in plants. The Japanese Journal of Genetics, 63: 359-366.
Go to original source...
- Fukui K., Nakayama S., Ohmido N., Yoshiaki H., Yamabe M. (1998): Quantitative karyotyping of three diploid Brassica species by imaging methods and localization of 45S rDNA loci on the identified chromosomes. Theoretical Applied Genetics, 96: 325-330.
Go to original source...
Go to PubMed...
- Gerlach W.L., Dyer T.A. (1980): Sequence organization of the repeated units in the nucleus of wheat which contains 5S rRNA genes. Nucleic Acids Research, 8: 4851-4865.
Go to original source...
Go to PubMed...
- Guimarães G., Cardoso L., Oliveira H., Santos C., Duarte P., Sottomayor M. (2012): Cytogenetic characterization and genome size of the medicinal plant Catharanthus roseus (L.) G. Don. AoB Plants: pls002.
- Hasterok R., Jenkins G., Langdon T., Jones R.N., Maluszynska J. (2001) Ribosomal DNA is an effective marker of Brassica chromosomes. Theoretical and Applied Genetics, 103: 486-490.
Go to original source...
- Iwata A., Greenland C.M., Jackson S.A. (2013): Cytogenetics of legumes in the Phaseoloid clade. The Plant Genome, 6: 1-8.
Go to original source...
- Levan A., Fredga K., Sandberg A. (1964): Nomenclature for centromeric position in chromosomes. Hereditas, 52: 201-220.
Go to original source...
- Li M.X., Chen R.Y. (1985): A suggestion on the standardization of karyotype analysis in plants. Journal of Wuhan Botanical Research, 3: 297-302. (in Chinese)
- Li R.Q. (1989): Studies on Karyotypes of Vegetables in China. Wuhan, Wuhan University Press. (in Chinese)
- Moscone E.A., Lein F., Lambrou M., Fuchs J., Schweizer D. (1999): Quantitative karyotyping and dual-color FISH mapping of 5S and 18S-25S rDNA probes in the cultivated Phaseolus species (Leguminosae). Genome, 42: 1224-1233.
Go to original source...
Go to PubMed...
- Paszko B. (2006): A critical review and a new proposal of karyotype asymmetry indices. Plant Systematics and Evolution, 258: 39-48.
Go to original source...
- Perry K.L., Palukaitis P. (1990): Transcription of tomato ribosomal DNA and the organization of the intergenic spacer. Molecular and General Genetics, 221: 102-112.
Go to original source...
Go to PubMed...
- Peterson D.G., Lapitan N.L.V., Stack S.M. (1999): Localization of single- and low-copy sequences on tomato synaptonemal complex spreads using fluorescence in situ hybridization (FISH). Genetics, 152: 427-439.
Go to original source...
Go to PubMed...
- Raskina O., Belyayev A., Nevo E. (2004): Activity of the En/Spm-like transposons in meiosis as a base for chromosome repatterning in a small, isolated peripheral population of Aegilops speltoides Tausch. Chromosome Research, 12: 153-161.
Go to original source...
Go to PubMed...
- Schubert I., Wobus U. (1985): In situ hybridization confirms jumping nucleolus organizing regions in Allium. Chromosoma, 92: 143-148.
Go to original source...
- She C.W., Liu J.Y., Song Y.C. (2006): CPD staining: an effective technique for detection of NORs and other GC-rich chromosomal regions in plants. Biotechnic & Histochemistry, 81: 13-21.
Go to original source...
Go to PubMed...
- She C.W., Jiang X.H., Ou L.J., Liu J., Long K.L., Zhang L.H., Duan W.T., Zhao W., Hu J.C. (2015): Molecular cytogenetic characterisation and phylogenetic analysis of the seven cultivated Vigna species (Fabaceae). Plant Biology, 17: 268-280.
Go to original source...
Go to PubMed...
- Smartt J. (1990): Grain Legumes: Evolution and Genetic Resources. Cambridge, Cambridge University Press.
Go to original source...
- Zoldos V., Papes D., Cerbah M., Panaud O., Besendorfer V., Siljak-Yakovlev S. (1999): Molecular-cytogenetic studies of ribosomal genes and heterochromatin reveal conserved genome organisation among 11 Quercus species. Theoretical and Applied Genetics, 99: 969-977.
Go to original source...
This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.